Senior Seminar (Mating Systems): Class Policies and Syllabus

 

Instructor:                   Vikram K. Iyengar                           

Office:                         Mendel 190C (East end of hallway, inside office suite)       

Research lab:               Mendel 113 (look for me here if I’m not in 190C)

Office Hours:              Wednesdays 10:30am – 12:00pm, or by appointment

Phone:                         519-8081 (office); 519-5186 (research lab)   

email:                           vikram.iyengar@villanova.edu (I prefer email messages over voice mail)

Course website:           http://webct.villanova.edu/SCRIPT/Fall08_BIO_5100_002/scripts/serve_home

Class time:                   Mondays, 12:30pm – 1:20pm            John Barry Hall, Room 211

Required text:             Pechenik, J. 2007. A Short Guide To Writing About Biology. Sixth Edition,

                                       Longmans. (you should have a copy already – 5th edition is OK)

 

 

Course Objectives

Senior seminar (Bio 5100) is a one-credit course that serves as a capstone element within the Biology curriculum.  The main purposes of the course are to provide students with an opportunity to present biological information verbally before a peer audience, to learn how to communicate in the biological field using both a technical and informal style of writing, and to discuss information presented.  Bio 5100 fulfills part of the core writing requirement for majors within the Department of Biology – therefore, all sections of Bio 5100 follow common guidelines about course goals and organization, although some details and grade weights vary among sections depending on the topic and the discretion of the instructor.  

A priority for the course is to provide each student with opportunities to demonstrate their ability to gather sources on a specific topic at an advanced level; to read and understand those sources; and to present summaries, in oral and written formats, of the information. A companion priority is for students to engage presenters in discussion about the information included within peer seminars and in assigned readings.

The theme for this seminar course is Mating Systems. Student presentations will consist of case-study summaries about particular species and their mating system. Discussions based on the case-study presentations will explore associated broader patterns and principles within the field of animal behavior.

 

Course Expectations

Students completing the class will be expected to:

·      Become familiar with the scientific background (including current sources in the technical literature) relating to the biology of a particular threatened species

·      Prepare and deliver an effective summary of that species’ reproductive behavior, with particular attention to interesting aspects of its mating system

·      Actively participate in all class meetings in which they are not the primary presenter, through involvement in question-and-answer sessions and general discussion


Course Components and Grading

40%    Individual oral presentation (seminar).  Student presentations should last about 30 minutes to allow ample time for discussion. Student presenters must use PowerPoint.

            Each student’s seminar should constitute a summary of the available scientific information pertaining to a particular species’ mating system and other interesting aspect about its reproductive biology.  Although there is some latitude in choosing a specific topic for your presentation, I would like to make sure that you all cover a variety of topics without too much overlap.  I will allow students to choose topics on a first-come/first-serve basis, with priority given to students who are presenting in the first half of the semester.

            The seminar must be based on at least three (3) primary articles in the mainstream scientific literature, i.e., research reports (with original empirical data) in journals such as Animal Behaviour, Behavioral Ecology, Behavioral Ecology and Sociobiology, Ecology, Ethology, or Oecologia.  At least one article must have been published after 2003. The presenter must explain to the class the details of at least one research article, relating directly to the species’ mating system, within their seminar (i.e., background of the study, methods, results (including presentation of the study’s data), conclusions of the authors, and broader implications). Each presenter must obtain my approval for your species/topic at least two (2) weeks prior to your seminar date. For this, you will need to show that you have identified and obtained at least one recent appropriate source.

            Each presenter must pass bibliographic information and a PDF file along to me at least 10 days before their seminar date for one (1) journal article or other directly relevant source that class peers will be required to read prior to the relevant seminar. Presenters should choose a source that will help prepare the class to understand and appreciate the substance of the seminar; it should not necessarily be one of the central primary sources that the presenter will focus upon within their seminar (it’s a good idea to save something ‘new’ for the seminar itself!). Dr. Curry will pass the materials along to the class 1 week prior to the relevant seminar.

Evaluation of student presentations will be based on:

1.   Content: How effectively did the student summarize and synthesize the information?

2.   Presentation clarity: How effectively did the presenter use their voice and visual aids to present conceptual and factual information to the audience?

3.   Knowledge of topic, as reflected by presentation substance and ability to answer questions on the topic.

10%    Presentation Abstract. Synopsis of student’s own oral presentation, targeted for an audience of informed and interested specialists (i.e., the other students in the class and the instructor). The abstract should be 200-300 words in length and typed (double-spaced, 12 point).  This piece will identify the title of your talk, along with a synopsis of the primary topic, the evidence, and a summary of your interpretation/conclusions of your presentation.  This abstract should be submitted (via email) to me the day before your seminar.  Each student will receive feedback from me and from a peer on a draft version of this abstract, and then resubmit a revised version a week later for final grading.  The final grade for the Abstract will be based on your final ‘product’ and on how well you dealt with my comments during revision.

5%      Annotated Bibliography. List of all sources forming the basis for the oral presentation, with a sentence for each about its contribution or relevance. Use the formatting style of the journal Animal Behaviour.  Topic must be chosen such that the speaker includes (and covers in the presentation) at least one primary literature reference published after 2003, plus at least two additional directly relevant primary literature sources (papers in peer-reviewed scientific journals).

10%    Non-technical Summary of another student’s presentation. Synopsis of the substance of someone else’s oral presentation, written for a general literate audience (i.e., educated people who are not specialists in the discipline).  This a brief non-technical summary should be about 2-3 pages in length and typed (double-spaced, 12 point).  This summary should summarize the main question(s) posed by the Presenters as well as the major points of the presentation.  Do not simply recite the topics presented; rather this piece should present some specific substantive details of selected topics associated with the general subject. In this regard, it will resemble an article such as one might find in Science News or the Science section of The New York Times. You do not need to include any formal citations.  To avoid the typical crunch at the end of the semester, these technical summaries will be due two weeks after the presentation.

10%    Role as Discussion Leader (DL) for another student’s presentation. The DL will serve as moderator for the relevant class meeting; she/he will introduce the speaker and then manage the question-and-answer session after the presentation. The DL also should prepare questions for the class (more than the presenter) pertaining to the substance of the presentation and the associated assigned reading. Our target for general Q & A will be about 10 minutes, followed by about 10 minutes of discussion led by the DL.

20%    Participation in other discussions (besides own and the one for which student is Discussion Leader). Evaluation will be based on involvement in Q & A sessions and evidence, during general discussion, that student has read reading(s) assigned prior to each week’s presentation. Each student will also be asked to provide editorial comment on at least one peer’s presentation and on at least one (different) peer’s Abstract.

5%      Evaluation of Department of Biology weekly seminar. Each student is required to attend at least one (1) departmental seminar.  Seminars usually take place on Thursdays at 5:00pm, and the schedule will be posted at http://www.villanova.edu/artsci/biology/news/seminars.htm. Each student attendee will be required to complete a form evaluating the effectiveness of the seminar (clarity of presentation, use of technology, etc.).  If possible, students should plan to attend the seminar(s) that are most closely related to our topic. If a student attends and evaluates more than one seminar (on any topic), I will based your grade for this piece of the course on your ‘best’ evaluation (most thorough and insightful), while also taking the extra participation into account, to a small extent, during final grade determination.

 

Academic Integrity

 

I expect all students to adhere strictly to the College’s principles of academic honesty throughout this course. I regret to say that I have had to enforce these policies and fail students in courses for violation of these principles of academic (and scientific) integrity. Be sure that you know all of the relevant definitions and policies. This includes all aspects of submitting written assignments: take careful notes as you review literature sources (including complete bibliographic information), save records of your work (don’t submit an assignment without keeping a record for yourself), acknowledge all sources, and use the computers appropriately. Also, the work you do for this course should be only for this course; submitting the same work for multiple classes (without the explicit agreement of instructors from all courses involved) is a violation of College policies. The College’s policies pertaining to all Academic Integrity issues will be strictly adhered to and the appropriate penalty will be assessed at the discretion of the instructor.  There will be no exceptions to this policy.

I can only give you all the credit you deserve if I can tell how much of the work is uniquely yours. Obviously, do not attempt to copy—or even to paraphrase nearly verbatim—material directly from any other source. Even if you were to give a reference for a source you cited this way, you still would be falling short of my expectations for the assignment, because the words would not be your own. Read your sources, work towards an understanding of their content, and then restate the essentials in your own words … with appropriate acknowledgment of the source. Try to write so that the reader can reasonably infer where every piece of information and every idea came from. If an idea is yours, say so using active voice and first person: “I think that the analysis of Jones (1992) is flawed because…” Where the material instead comes from somewhere else (i.e., something you didn’t know before you started researching your topic), you must make it clear where you got the information through the use of text citations. Pechenik (2004) provides additional helpful advice about writing so that your sources are acknowledged fully, and so that your writing is clear, simple, and concise. Use his book!

Notes about using the Internet for help with papers

The Internet can be a valuable source of information and help for writing assignments … but it can also provide you with useless trash. You have an obligation to try to assess whether information from the Web or another electronic source is any good. In general, I advise you AGAINST relying on Web sites for information to cite in your papers (except for sites that provide electronic versions of scholarly journal articles). However, you may want to use the Internet to find information that helps you get started toward a topic (e.g., by participating in an on-line bulletin board, or by asking questions of a practicing scientist via email).

 


The Evaluation of Assignments

Below is an outline of the factors I will take into consideration in assigning your final grade on papers and lab exercises, with a comparable grading scale applied to other assignments. [Adapted from materials distributed in Writing Across the Curriculum seminar, Villanova University, April 1994, directed by D. Anselmi, B. Wall, and D. Zannoni, Trinity College.]

Grade: C

Paper satisfactorily (but minimally) meets expectations of the assignment. It directly addresses a question or issue relevant to the scope of the course, with adequate reliance on appropriate biological literature sources. It presents a logical argument with a clear statement of your central objectives; develops an argument that incorporates accurately reported information from primary literature sources; and reaches a clearly explained conclusion that follows logically from that argument. The argument is developed by an organized sequence of main points and supported by specific details and examples. The text is readable and relatively free of errors in syntax, grammar, spelling, usage, punctuation, and requested format.

Grade: B

Paper fulfills all of the requirements of a “C” paper and, in addition, presents a central argument that is well thought out and shows careful analysis of hypotheses and evidence in the biological literature. The argument demonstrates original and critical thought in synthesis and analysis. Points of interpretation are soundly and thoroughly argued. Supporting evidence is strong and extensive. Text contains few errors.

Grade: A

Paper fulfills all of the requirements of a “B” paper and, in addition, presents an argument that is outstanding in its clarity, logic, rhetorical skillfulness, and originality. It demonstrates that you have a thorough understanding of the paper’s topic and an ability to apply and communicate that understanding through excellent writing.

Grade: D

Paper makes an attempt to address the issue or question posed, but has one or more serious problems: it lacks a central thesis; it fails to develop a consistent, logical, well-organized argument; details are inaccurate or few; the text is difficult to read because of multiple errors.

Grade: F

Paper contains no central question or problem, or it makes no attempt (or a fake attempt) to address a stated question. The paper fails to develop an argument of any sort. The text is filled with errors. The paper shows little or no indication that the author attempted to meet the expectations of the assignment, or to follow directions.

 

A paper that contains any plagiarized material, that fails to incorporate adequate acknowledgment of all sources, or that otherwise violates the standards of academic integrity established by the University, Department, and instructor will receive a grade of “F”and trigger disciplinary procedures that can result in failure (F) for the entire course … and even expulsion from the University.


Writing An Abstract: Some Advice on How to Prepare an Abstract for a Seminar

 

Writing an abstract for a seminar is in some ways different than writing one for a research report because your talk is inherently a review with some references to the primary literature, rather than only a presentation of results from original research. The style differs a bit, because a review emphasizes scientific generalizations drawn from a base of evidence, rather than the results from one particular original study.

 

However, the purpose of an abstract should be the same in either case: it should state the ‘core’ of the scientific information contained in your oral or written presentation. Consequently, the emphasis in an abstract for the kind of presentation you are giving should be on what biological patterns and mechanisms you described and synthesized in your talk, and on the conclusions you reached (your “take-home messages”) based on the information you reviewed.

 

None of us will have had the opportunity to read your abstract before you give your talk. Therefore, it should not be phrased in the future tense (e.g., “I will describe…”). Rather, it should emphasize the main points of the presentation that already happened. The reader is concerned mainly with the “guts” of the talk, as emphasized above. For this application, write your abstract in the present tense so that it thoroughly describes the context, objectives, information base, and conclusions in your talk—in a way that encapsulates everything you said for later “consumption.”1  Emphasize patterns and relationships that are generally true.  Note, however, that if you refer to things that other scientists did or measured (as opposed to the relationships they stated as conclusions), then you would be correct in using past tense. Use declarative statements, and be as concise yet as informative as you can.

 

One thing you should never include in any kind of abstract – even though you will see it in the published literature – is a final statement that goes something like, “The significance of these results will be discussed.”  or  “The significance of these results were discussed.” Such a line does not pique my interest.  With the possible exception of a “teaser”-type abstract (trying to get people interested in coming to a talk before it’s given), such a statement adds nothing to the abstract’s information content. Avoid it like the plague!! 

 


Tentative Course Syllabus

(Student assignments will be filled in later on the course website)

 

 

Date

Agenda

Lecturer

DL

Summary Writer

Abstract Reviewer

Aug 25

Course Overview

Dr. Vik

 

 

 

Sept 1

No Classes – Labor Day

 

 

 

 

Sept 8

Intro to Sexual Selection

Dr. Vik

 

 

 

Sept 15

Intro to Mating Systems

Dr. Vik

 

 

 

Sept 22

Student Presentation 1

 

 

 

 

Sept 29

Student Presentation 2

 

 

 

 

Oct 6

Student Presentation 3

 

 

 

 

Oct 13

No Classes – Fall Break

 

 

 

 

Oct 20

Student Presentation 4

 

 

 

 

Oct 27

Student Presentation 5

 

 

 

 

Nov 3

Student Presentation 6

 

 

 

 

Nov 10

Student Presentation 7

 

 

 

 

Nov 17

Student Presentation 8

 

 

 

 

Nov 24

Student Presentation 9